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Landmark or Region: Examples: Chr1:100000..105000, AT1G01010, microRNA, processing.

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Data Source Arabidopsis thaliana Col0 Aspergillus nidulans FGSC A4 Doratomyces sp NGp51 Fusarium fujikuroi B14 Fusarium fujikuroi B20 Fusarium fujikuroi C1995 Fusarium fujikuroi E282 Fusarium fujikuroi FSU48 Fusarium fujikuroi MRC2276 Fusarium fujikuroi NCIM1100 Fusarium fujikuroi m567 Fusarium fujikuroi v21 Fusarium graminearum PH1 Fusarium mangiferae MRC7560 Fusarium oxysporum FO2 v2 Fusarium proliferatum ET1 Fusarium proliferatum NRRL62905 Fusarium ruand V641 Fusarium verticillioides FV3 Trichoderma reesei QM6a Verticillium nonalfalfae vertwild

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The following 121 regions match your request.

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Chr1

 

 

 

 

 

 

 

Chr2

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Chr3

 

 

 

 

 

 

 

 

 

Chr4

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Chr5

Name	Type	Description	Position	Match Score
AT1G12700	gene:Araport11	RNA processing FACTOR	Chr1:4323533..4326377	20
AT1G12700.2	mRNA:Araport11	RNA processing FACTOR	Chr1:4323533..4326377	20
AT1G12700.3	mRNA:Araport11	RNA processing FACTOR	Chr1:4323556..4326333	20
AT1G12700.1	mRNA:Araport11	RNA processing FACTOR	Chr1:4324419..4326227	20
AT2G30440	gene:Araport11	thylakoid processing peptide	Chr2:12972682..12975542	20
AT2G30440.1	mRNA:Araport11	thylakoid processing peptide	Chr2:12972682..12975542	20
AT4G03180	gene:Araport11	rRNA-processing protein	Chr4:1403117..1404937	20
AT4G03180.1	mRNA:Araport11	rRNA-processing protein	Chr4:1403117..1404937	20
AT4G03180.2	mRNA:Araport11	rRNA-processing protein	Chr4:1403739..1404663	20
AT1G03360	gene:Araport11	ribosomal RNA processing 4	Chr1:824517..826399	14
AT1G03360.1	mRNA:Araport11	ribosomal RNA processing 4	Chr1:824517..826399	14
AT1G11240	gene:Araport11	ribosomal RNA-processing protein	Chr1:3766754..3769799	14
AT1G11240.1	mRNA:Araport11	ribosomal RNA-processing protein	Chr1:3766754..3769799	14
AT1G48460.1	mRNA:Araport11	tRNA-processing ribonuclease BN	Chr1:17910779..17913342	14
AT1G48460	gene:Araport11	tRNA-processing ribonuclease BN	Chr1:17910779..17913344	14
AT1G48460.2	mRNA:Araport11	tRNA-processing ribonuclease BN	Chr1:17911346..17913344	14
AT1G62670	gene:Araport11	rna processing factor 2	Chr1:23204256..23206822	14
AT1G62670.1	mRNA:Araport11	rna processing factor 2	Chr1:23204256..23206822	14
AT1G62670.2	mRNA:Araport11	rna processing factor 2	Chr1:23204773..23206665	14
AT1G62710	gene:Araport11	beta vacuolar processing enzyme	Chr1:23223874..23226983	14
AT1G62710.1	mRNA:Araport11	beta vacuolar processing enzyme	Chr1:23223874..23226983	14
AT2G25940	gene:Araport11	alpha-vacuolar processing enzyme	Chr2:11063301..11066184	14
AT2G25940.1	mRNA:Araport11	alpha-vacuolar processing enzyme	Chr2:11063301..11066184	14
AT3G11964	gene:Araport11	RIBOSOMAL RNA PROCESSING 5	Chr3:3793731..3806743	14
AT3G11964.2	mRNA:Araport11	RIBOSOMAL RNA PROCESSING 5	Chr3:3793731..3806743	14
AT3G11964.1	mRNA:Araport11	RIBOSOMAL RNA PROCESSING 5	Chr3:3793957..3806626	14
AT3G20210	gene:Araport11	delta vacuolar processing enzyme	Chr3:7052347..7054743	14
AT3G20210.1	mRNA:Araport11	delta vacuolar processing enzyme	Chr3:7052347..7054743	14
AT4G32940	gene:Araport11	gamma vacuolar processing enzyme	Chr4:15900270..15903523	14
AT4G32940.1	mRNA:Araport11	gamma vacuolar processing enzyme	Chr4:15900270..15903523	14
AT1G44910.2	mRNA:Araport11	pre-mRNA-processing protein 40A	Chr1:16975604..16982661	11
AT1G44910	gene:Araport11	pre-mRNA-processing protein 40A	Chr1:16975604..16982965	11
AT1G44910.1	mRNA:Araport11	pre-mRNA-processing protein 40A	Chr1:16975604..16982965	11
AT1G54770	gene:Araport11	Fcf2 pre-rRNA processing protein	Chr1:20434550..20436453	11
AT1G54770.1	mRNA:Araport11	Fcf2 pre-rRNA processing protein	Chr1:20434550..20436453	11
AT1G54770.2	mRNA:Araport11	Fcf2 pre-rRNA processing protein	Chr1:20434639..20436040	11
AT1G80070	gene:Araport11	Pre-mRNA-processing-splicing factor	Chr1:30117847..30127811	11
AT1G80070.1	mRNA:Araport11	Pre-mRNA-processing-splicing factor	Chr1:30117847..30127811	11
AT3G16480	gene:Araport11	mitochondrial processing peptidase alpha subunit	Chr3:5599710..5603027	11
AT3G16480.1	mRNA:Araport11	mitochondrial processing peptidase alpha subunit	Chr3:5599710..5603027	11
AT3G19670	gene:Araport11	pre-mRNA-processing protein 40B	Chr3:6827986..6837505	11
AT3G19670.2	mRNA:Araport11	pre-mRNA-processing protein 40B	Chr3:6827986..6837505	11
AT3G19670.3	mRNA:Araport11	pre-mRNA-processing protein 40B	Chr3:6827986..6837505	11
AT3G19670.4	mRNA:Araport11	pre-mRNA-processing protein 40B	Chr3:6828030..6837503	11
AT3G19670.1	mRNA:Araport11	pre-mRNA-processing protein 40B	Chr3:6828062..6836588	11
AT3G19840	gene:Araport11	pre-mRNA-processing protein 40C	Chr3:6890988..6897510	11
AT3G19840.1	mRNA:Araport11	pre-mRNA-processing protein 40C	Chr3:6890988..6897510	11
AT3G22660	gene:Araport11	rRNA processing protein-like protein	Chr3:8016051..8017508	11
AT3G22660.1	mRNA:Araport11	rRNA processing protein-like protein	Chr3:8016051..8017508	11
AT5G20600	gene:Araport11	ribosomal RNA processing-like protein	Chr5:6966178..6968033	11
AT5G20600.1	mRNA:Araport11	ribosomal RNA processing-like protein	Chr5:6966178..6968033	11
AT5G30495	gene:Araport11	Fcf2 pre-rRNA processing protein	Chr5:11379907..11381657	11
AT5G30495.2	mRNA:Araport11	Fcf2 pre-rRNA processing protein	Chr5:11379907..11381657	11
AT5G30495.1	mRNA:Araport11	Fcf2 pre-rRNA processing protein	Chr5:11380102..11381600	11
AT5G38720.2	mRNA:Araport11	ribosomal RNA-processing 7 protein	Chr5:15508196..15510424	11
AT5G38720	gene:Araport11	ribosomal RNA-processing 7 protein	Chr5:15508196..15510713	11
AT5G38720.3	mRNA:Araport11	ribosomal RNA-processing 7 protein	Chr5:15508244..15510713	11
AT5G38720.1	mRNA:Araport11	ribosomal RNA-processing 7 protein	Chr5:15508244..15510713	11
AT5G61330	gene:Araport11	rRNA processing protein-like protein	Chr5:24657097..24661241	11
AT5G61330.1	mRNA:Araport11	rRNA processing protein-like protein	Chr5:24657097..24661241	11
AT5G61330.2	mRNA:Araport11	rRNA processing protein-like protein	Chr5:24657097..24661241	11
AT5G61330.3	mRNA:Araport11	rRNA processing protein-like protein	Chr5:24657099..24660231	11
AT1G24050	gene:Araport11	RNA-processing, Lsm domain-containing protein	Chr1:8506968..8508909	9
AT1G24050.1	mRNA:Araport11	RNA-processing, Lsm domain-containing protein	Chr1:8506968..8508909	9
AT1G42440	gene:Araport11	pre-rRNA-processing TSR1-like protein	Chr1:15895197..15900105	9
AT1G42440.1	mRNA:Araport11	pre-rRNA-processing TSR1-like protein	Chr1:15895197..15900105	9
AT1G52930	gene:Araport11	Ribosomal RNA processing Brix domain protein	Chr1:19711179..19713308	9
AT1G52930.1	mRNA:Araport11	Ribosomal RNA processing Brix domain protein	Chr1:19711179..19713308	9
AT1G56110	gene:Araport11	NOP56-like pre RNA processing ribonucleoprotein	Chr1:20984273..20986952	9
AT1G56110.1	mRNA:Araport11	NOP56-like pre RNA processing ribonucleoprotein	Chr1:20984273..20986952	9
AT1G63780	gene:Araport11	Ribosomal RNA processing Brix domain protein	Chr1:23664830..23667372	9
AT1G63780.1	mRNA:Araport11	Ribosomal RNA processing Brix domain protein	Chr1:23664830..23667372	9
AT1G70220	gene:Araport11	RNA-processing, Lsm domain-containing protein	Chr1:26446084..26448058	9
AT1G70220.2	mRNA:Araport11	RNA-processing, Lsm domain-containing protein	Chr1:26446084..26448058	9
AT1G70220.1	mRNA:Araport11	RNA-processing, Lsm domain-containing protein	Chr1:26446109..26448058	9
AT3G01160	gene:Araport11	pre-rRNA-processing ESF1-like protein	Chr3:54524..57541	9
AT3G01160.1	mRNA:Araport11	pre-rRNA-processing ESF1-like protein	Chr3:54524..57541	9
AT3G05060	gene:Araport11	NOP56-like pre RNA processing ribonucleoprotein	Chr3:1412867..1416056	9
AT3G05060.1	mRNA:Araport11	NOP56-like pre RNA processing ribonucleoprotein	Chr3:1412867..1416056	9
AT3G12860	gene:Araport11	NOP56-like pre RNA processing ribonucleoprotein	Chr3:4091567..4094195	9
AT3G12860.1	mRNA:Araport11	NOP56-like pre RNA processing ribonucleoprotein	Chr3:4091567..4094195	9
AT3G15460	gene:Araport11	Ribosomal RNA processing Brix domain protein	Chr3:5214084..5216261	9
AT3G15460.1	mRNA:Araport11	Ribosomal RNA processing Brix domain protein	Chr3:5214084..5216261	9
AT3G23620	gene:Araport11	Ribosomal RNA processing Brix domain protein	Chr3:8480025..8482222	9
AT3G23620.1	mRNA:Araport11	Ribosomal RNA processing Brix domain protein	Chr3:8480025..8482222	9
AT4G01560	gene:Araport11	Ribosomal RNA processing Brix domain protein	Chr4:676982..679276	9
AT4G01560.1	mRNA:Araport11	Ribosomal RNA processing Brix domain protein	Chr4:676982..679276	9
AT5G27120	gene:Araport11	NOP56-like pre RNA processing ribonucleoprotein	Chr5:9540861..9544065	9
AT5G27120.1	mRNA:Araport11	NOP56-like pre RNA processing ribonucleoprotein	Chr5:9540861..9544065	9
AT5G27140.2	mRNA:Araport11	NOP56-like pre RNA processing ribonucleoprotein	Chr5:9548542..9550374	9
AT5G27140	gene:Araport11	NOP56-like pre RNA processing ribonucleoprotein	Chr5:9548542..9550597	9
AT5G27140.1	mRNA:Araport11	NOP56-like pre RNA processing ribonucleoprotein	Chr5:9548542..9550597	9
AT5G46420	gene:Araport11	16S rRNA processing protein RimM family	Chr5:18829436..18833060	9
AT5G46420.1	mRNA:Araport11	16S rRNA processing protein RimM family	Chr5:18829436..18833060	9
AT1G04230	gene:Araport11	rRNA-processing EFG1-like protein (DUF2361)	Chr1:1125515..1128788	8
AT1G04230.1	mRNA:Araport11	rRNA-processing EFG1-like protein (DUF2361)	Chr1:1125515..1128788	8
AT1G04230.2	mRNA:Araport11	rRNA-processing EFG1-like protein (DUF2361)	Chr1:1125518..1128168	8
AT5G43720	gene:Araport11	rRNA-processing EFG1-like protein (DUF2361)	Chr5:17557088..17559412	8
AT5G43720.1	mRNA:Araport11	rRNA-processing EFG1-like protein (DUF2361)	Chr5:17557088..17559412	8
AT1G69340	gene:Araport11	appr-1-p processing enzyme family protein	Chr1:26065698..26069843	7
AT1G69340.1	mRNA:Araport11	appr-1-p processing enzyme family protein	Chr1:26065698..26069843	7
AT1G69340.2	mRNA:Araport11	appr-1-p processing enzyme family protein	Chr1:26065898..26069843	7
AT1G70610.1	mRNA:Araport11	transporter associated with antigen processing protein 1	Chr1:26621899..26626503	7
AT1G70610	gene:Araport11	transporter associated with antigen processing protein 1	Chr1:26621899..26626508	7
AT1G70610.2	mRNA:Araport11	transporter associated with antigen processing protein 1	Chr1:26621959..26626508	7
AT2G40600	gene:Araport11	appr-1-p processing enzyme family protein	Chr2:16946824..16948712	7
AT2G40600.1	mRNA:Araport11	appr-1-p processing enzyme family protein	Chr2:16946824..16948712	7
AT3G22510	gene:Araport11	Pre-rRNA-processing protein TSR2, conserved region	Chr3:7973394..7974395	7
AT3G22510.1	mRNA:Araport11	Pre-rRNA-processing protein TSR2, conserved region	Chr3:7973394..7974395	7
AT4G38780	gene:Araport11	pre-mRNA-processing-splicing factor-like protein	Chr4:18101296..18111082	7
AT4G38780.1	mRNA:Araport11	pre-mRNA-processing-splicing factor-like protein	Chr4:18101296..18111082	7
AT5G27990.1	mRNA:Araport11	Pre-rRNA-processing protein TSR2, conserved region	Chr5:10016662..10018441	7
AT5G27990	gene:Araport11	Pre-rRNA-processing protein TSR2, conserved region	Chr5:10016662..10018526	7
AT5G27990.2	mRNA:Araport11	Pre-rRNA-processing protein TSR2, conserved region	Chr5:10016877..10018526	7
AT5G39040	gene:Araport11	transporter associated with antigen processing protein 2	Chr5:15625460..15629835	7
AT5G39040.1	mRNA:Araport11	transporter associated with antigen processing protein 2	Chr5:15625460..15629835	7
AT5G39040.2	mRNA:Araport11	transporter associated with antigen processing protein 2	Chr5:15625524..15629802	7
AT1G60170	gene:Araport11	pre-mRNA processing ribonucleoprotein binding region-containing protein	Chr1:22192758..22195400	6
AT1G60170.1	mRNA:Araport11	pre-mRNA processing ribonucleoprotein binding region-containing protein	Chr1:22192758..22195400	6
AT2G06822.1	pseudogenic_transcript:Araport11	pseudogene of Ribosomal RNA processing Brix domain protein	Chr2:2728708..2729075	6
AT3G60610.1	pseudogenic_transcript:Araport11	pseudogene of pre-mRNA processing ribonucleoprotein binding region-containing protein	Chr3:22403237..22405048	5

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 BS_seq

 BS_seq

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fks_mock1_bismark_CHG	fks_NAA1_bismark_CpG	P3_mock2_bismark_CHH
fks_mock1_bismark_CHH	fks_NAA2_bismark_CHG	P3_mock2_bismark_CpG
fks_mock1_bismark_CpG	fks_NAA2_bismark_CHH	P3_NAA1_bismark_CHG
fks_mock2_bismark_CHG	fks_NAA2_bismark_CpG	P3_NAA1_bismark_CHH
fks_mock2_bismark_CHH	P3_mock1_bismark_CHG	P3_NAA1_bismark_CpG
fks_mock2_bismark_CpG	P3_mock1_bismark_CHH	P3_NAA2_bismark_CHG
fks_NAA1_bismark_CHG	P3_mock1_bismark_CpG	P3_NAA2_bismark_CHH
fks_NAA1_bismark_CHH	P3_mock2_bismark_CHG	P3_NAA2_bismark_CpG

 General

 General

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CDS [?]

Genes

ORFs

 Transcription

 Transcription

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fks_mock	fks_NAA_1	P3_mock_2
fks_mock_1	fks_NAA_2	P3_NAA
fks_mock_2	P3_mock	P3_NAA_1
fks_NAA	P3_mock_1	P3_NAA_2

 Processed_ChIP

 Processed_ChIP

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ASKb_C1	ASKb_OE18_7_input	DEK3_NaCl_R1
ASKb_C2	ASKb_OE37_4	DEK3_NaCl_R5
ASKb_input	ASKb_OE37_4_input	DEK3_NaCl_R8
ASKb_NaCl1	DEK3_Control_R1	DEK3_NaCl_vs_C_R1
ASKb_NaCl2	DEK3_Control_R5	DEK3_NaCl_vs_C_R5
ASKb_OE18_7	DEK3_Control_R8	DEK3_NaCl_vs_C_R8

 Region

 Region

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GC Content

 Analysis

 Analysis

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Restriction Sites

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Snapshot Timestamp [GMT]

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